Tani, Kazutoshi

Cellular and Structural Physiology Institute (CeSPI), Nagoya University

 

1. Publications

ResearcherID:B-3705-2008

 

(i) Original Paper

1. K. Tani, H. Sasabe and C. Toyoshima

A set of computer programs for determining defocus and astigmatism in electron images.

Ultramicroscopy (1996) 65:31-44

2. Y. Kuroda, K. Tani, Y. Matsuo, S. Yokoyama

   Automated search of natively folded protein fragments for high-throughput structure

   determination in structural genomics.

Protein Sci. (2000) 9:2313-2321

3. C. Sato, K. Hamada, T. Ogura, A. Miyazawa, K. Iwasaki, Y. Hiroaki, K. Tani, A. Terauchi,

Y. Fujiyoshi, K. Mikoshiba

Inositol 1,4,5-trisphosphate Receptor Contains Multiple Cavities and L-shaped Ligand-binding

Domains

J. Mol. Biol. (2004) 336:155-164

4. T. Kasai, M. Inoue, S. Koshiba, T. Yabuki, M. Aoki, E. Nunokawa, E. Seki, T. Matsuda,

 N. Matsuda, Y. Tomo, M. Shirouzu, T. Terada, N. Obayashi, H. Hamana, N. Shinya,

 A. Tatsuguchi, S. Yasuda, M. Yoshida, H. Hirota, Y. Matsuo, K. Tani, H. Suzuki, T. Arakawa,

 P. Carninci, J. Kawai, Y. Hayashizaki, T. Kigawa, S. Yokoyama

Solution structure of a BolA-like protein from Mus musculus.

Protein Sci. (2004) 13:545-548

5. N. Gyobu, K. Tani, Y. Hiroaki, A. Kamegawa, K. Mitsuoka, Y. Fujiyoshi

Improved specimen preparation for cryo-electron microscopy using a symmetric carbon

sandwich technique

J. Struct. Biol. (2004) 146: 325-333

6. T. Maeda, M. Inoue, S. Koshiba, T. Yabuki, M. Aoki, E. Nunokawa, E. Seki, T. Matsuda,

 @Y. Motoda, A. Kobayashi, F. Hiroyasu, M. Shirouzu, T. Terada, N. Hayami, Y. Ishizuka,

 N. Shinya, A. Tatsuguchi, M. Yoshida, H. Hirota, Y. Matsuo, K. Tani, T. Arakawa, P. Carninci,

J. Kawai, Y. Hayashizaki, T. Kigawa, S. Yokoyama,

Solution structure of the SEA domain from the murine homologue of ovarian cancer antigen

CA125 (MUC16)

J. Biol. Chem. (2004) 279:13174-13182

7. C. Gerle, K. Tani, K. Yokoyama, M. Tamakoshi, M. Yoshida, Y. Fujiyoshi, K. Mitsuoka

   Two-dimensional crystallization and analysis of projection images of intact Thermus

thermophilius  V-ATPase

J. Struct. Biol. (2006) 153:200-206

8. Y. Hiroaki*, K. Tani*, A. Kamegawa, N. Gyobu, K. Nishikawa, H. Suzuki, T. Walz, S. Sasaki,

   K. Mitsuoka, K. Kimura, A. Mizoguchi, Y. Fujiyoshi

  Implications of the Aquaporin-4 Structure on Array Formation and Cell Adhesion

  J. Mol. Biol. (2006) 355:628-639  (*Equally first author)

9. A. Oshima, K. Tani, Y. Hiroaki, Y. Fujiyoshi, G. E. Sosinsky

   Three-dimensional structure of a human connexin26 gap junction channel reveals a plug in the

   Vestibule

   Proc. Natl. Acad. Sci. U. S. A. (2007) 104:10034-10039

10. M. Toei, C. Gerle, M. Nakano, K. Tani, N. Gyobu, M. Tamakoshi, N. Sone, M. Yoshida,

    Y. Fujiyoshi, K. Mitsuoka, K. Yokoyama

    Dodecamer rotor ring defines H+/ATP ratio for ATP synthesis of prokaryotic V-ATPase from

 Thermus thermophiles

Proc. Natl. Acad. Sci. U. S. A. (2007) 104:20256-20261

11. T. Nishizawa, K. Abe, K. Tani, Y. Fujiyoshi

    Structural analysis of 2D crystals of gastric H+,K+-ATPase in different states of the transport

 Cycle

 J. Struct. Bol. (2008) 162:219-228

12. A. Oshima, K. Tani, Y. Hiroaki, Y. Fujiyoshi, G. E. Sosinsky

Projection structure of a N-terminal deletion mutant of connexin 26 channel with decreased

central pore density

Cell. Commun. Adhes. (2008) 15:85-93

13. K. Abe, K. Tani, T. Nishizawa, Y. Fujiyoshi

    Inter-Subunit Interaction of Gastric H+,K+-ATPase Prevents Reverse Reaction of the Transport

 Cycle

 EMBO J. (2009) 28:1637-1643

14. K. Tani, T. Mitsuma, Y. Hiroaki, A. Kamegawa, K. Nishikawa, Y. Tanimura, Y. Fujiyoshi

    Mechanism of aquaporin-4fs fast and highly selective water conductance and proton exclusion

    J. Mol. Biol. (2009) 389:694-706 (ŽGŽƒJƒo[ŒfΪ)

15. K. Abe, K. Tani, Y. Fujiyoshi

    Structural and functional characterization of H+, K+-ATPase with bound fluorinated phosphate

analogs

J. Struct. Biol. (2010) 170:60-68

16. T. Mitsuma*, K. Tani*, Y. Hiroaki, A. Kamegawa, H. Suzuki, H. Hibino, Y. Kurachi, Y. Fujiyoshi

    Influence of the cytoplasmic domains of aquaporin-4 on water conduction and array formation

    J. Mol. Biol. (2010) 402:669-681  (*Equally first author)

17. K. Yakata, K. Tani$, Y. Fujiyoshi

    Water permeability and characterization of aquaporin-11

    J. Struct. Biol. (2011) 174:315-320. ($Corresponding author.)

18. A. Oshima, K. Tani, M. M. Toloue, Y. Hiroaki, A. Smock, S. Inukai, A. Cone, B. J. Nicholson,

    G. E. Sosinsky, Y. Fujiyoshi

    Asymmetric Configurations and N-terminal Rearrangements in Connexin26 Gap Junction

    Channels

J. Mol. Biol. (2011) 405:724-735

19. K. Abe, K. Tani, Y. Fujiyoshi

    Conformational rearrangement of gastric H+,K+-ATPase induced by an acid suppressant

Nat. Commun. (2011), 2:155 pp1-7.

20. K. Abe, K. Tani, T. Friedrich, Y. Fujiyoshi

Cryo-EM structure of gastric H+,K+-ATPase with a single occupied cation-binding site

Proc. Natl. Acad. Sci. U. S. A. (2012) 109:18401-18406

21. H. Suzuki, Y. Ito, Y. Yamazaki, K. Mineta, M. Uji, K. Abe, K. Tani, Y. Fujiyoshi, S. Tsukita

    Strand formation by a trimeric unit repeat of four-transmembrane proteins in Euglena

    Nat. Commun, (2013) 4:1766 pp1-8.

22. K. Tani, C.P. Arthur, M. Tamakoshi, K. Yokoyama, K. Mitsuoka, Y. Fujiyoshi, C. Gerle

    Visualization of two distinct states of disassembly in the bacterial V-ATPase from Thermus

    Thermophilus

 Microscopy  (2013) 62:467-474 (selected as an Editorfs Choice)

23. C.J. Tsai*, K. Tani*, K. Irie*, Y. Hiroaki, T. Shimomura, D.G. McMillan, G.M. Cook,

G.F.X. Schertler, Y. Fujiyoshi, X.D. Li

Two alternative conformations of a voltage-gated sodium channel

J. Mol. Biol. (2013) 425:4074-4088. (*Equally first author) (ŽGŽƒJƒo[ŒfΪ)

(selected as an Editorfs Choice)

24. F. Yang, K. Abe, K. Tani, Y. Fujiyoshi

    Carbon sandwich preparation preserves quality of two-dimensional crystals for cryo-electron

 Microscopy

Microscopy  (2013) 62:597-606

25. S. Maeda, K. S-Itoh, K. Mieda, M. Yamamoto, Y. Nakashima, Y. Ogasawara, C. Jiko, K. Tani,

 A. Miyazawa, C. Gerle, S. Yoshikawa

Two-dimensional crystallization of intact F-ATP synthase isolated from bovine heart

mitochondria.

Acta Cryst. (2013) F69:1368-1370

26. S. Shimada, K. S-Itoh, S. Amano, Y. Akira, A. Miyazawa, T. Tsukihara, K. Tani, C. Gerle,

   S. Yoshikawa

Three-dimensional structure of bovine heart NADH:ubiquinone oxidoreductase (complex I) by

electron microscopy of a single negatively stained two-dimensional crystal.

Microscopy (2014) 63:167-174

27. H. Suzuki*, T. Nishizawa*, K. Tani*, Y. Yamazaki, A. Tamura, R. Ishitani, N. Dohmae,

   S. Tsukita, O. Nureki, Y. Fujiyoshi

Crystal structure of a claudin provides insight into the architecture of tight junctions.

Science (2014) 344:304-307. (*Equally first author)

28. K. Abe, K. Tani, Y. Fujiyoshi

Systematic Comparison of Molecular Conformations of H+,K+-ATPase Reveals an Important

Contribution of the A-M2 Linker for the Luminal Gating.

J. Biol. Chem. (2014) 289:30590-30601.

29. H. Suzuki*, K. Tani*, A. Tamura, S. Tsukita, and Y. Fujiyoshi

Model for the architecture of claudin-based paracellular ion channels through tight junctions.

J. Mol. Biol. (2015) 427:291-297. (*Equally first author)

30. Y. Saitoh*, H. Suzuki*, K. Tani*, K. Nishikawa, K. Irie, Y. Ogura, A. Tamura, S. Tsukita, and Y. Fujiyoshi

Structural insight into tight junction disassembly by Clostridium perfringens enterotoxin.

Science (2015) 347:775-778. (*Equally first author)

31. C. Jiko, K.M. Davies, K. Shinzawa-Itoh, K. Tani, S. Maeda, D.J. Mills, T. Tsukihara, Y. Fujiyoshi,

   W. Kuhlbrandt, C. Gerle

   Bovine F1Fo ATP synthase monomers bend the lipid bilayer in 2D membrane crystals.

eLife (2015) 4:e06119.

32. A. Kamegawa, Y. Hiroaki, K. Tani$, Y. Fujiyoshi$,

      Two-dimensional crystal structure of aquaporin-4 bound to the inhibitor acetazolamide. 

      Microscopy, 65:177-184. ($Equally corresponding author)

33. H. Tanaka, Y. Yamamoto, H. Kashihara, Y. Yamazaki, K. Tani, Y. Fujiyoshi, K. Mineta, K. Takeuchi,

A. Tamura, and S. Tsukita

Claudin-21 has a paracellular channel role at tight junctions.

Mol. Cell Biol. (2016) 36:954-964.

34. Y. Osuda, K. Shinzawa-Itoh, K. Tani, S. Yoshikawa, T. Tsukihara, C. Gerle

Two-dimensional crystallization of monomeric bovine cytochrome c oxidase with bound cytochrome c

in reconstituted lipid membranes.

Microscopy (2016) 65:263-267.

35. A. Oshima, T. Matsuzawa, K. Murata, K. Tani, Y. Fujiyoshi

Hexadecameric structure of an invertebrate gap junction channel.

J. Mol. Biol. (2016) 428:1227-1236.

36. A. Okuta, K. Tani, S. Nishimura, Y. Fujiyoshi, T. Doi

 Thermostabilization of the human endothelin type-B receptor. 

J. Mol. Biol. (2016) 428:2265-2274.

37. W. Shihoya, T. Nishizawa, A. Okuta, K. Tani, N. Dohmae, Y. Fujiyoshi, O. Nureki, T. Doi

Activation mechanism of endothelin ETB receptor by endothelin-1.

Nature (2016) 537:363-368.

38. A. Oshima, K. Tani, Y. Fujiyoshi

Atomic structure of the innexin-6 gap junction channel determined by cryo-EM.

Nat. commun. 7 (2016) 13681 pp1-8.

 

(ii) Review and Book

1.       Y. Tanimura, K. Tani, H. Suzuki, K. Nishikawa, A. Kamegawa, Y. Hiroaki, Y. Fujiyoshi

   STRUCTURE AND INHIBITOR OF WATER CHANNEL IN BRAIN.

 Water: The Forgotten Biological Molecule, D. L. Bihan and H. Fukuyama ed.,Pan Stanford Publishing

 (2011) 179-204.

2.  K. Tani, Y. Fujiyoshi

Water channel structures analysed by electron crystallography.

Biochim. Biophys. Acta. 1840 (2014) 1605-1613

2.       H. Suzuki, K. Tani, Y. Fujiyoshi

Crystal structures of claudins: insights into their intermolecular interactions.

Ann. N. Y. Acad. Sci. (E-pub)

 

 

2. Grants-in-Aid@